OCA Atlas for 5MH3

5MH3

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL

enzyme

Primary reference

DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum., Jiang S, Wang L, Huang M, Jia Z, Weinert T, Warkentin E, Liu C, Song X, Zhang H, Witt J, Qiu L, Peng G, Song L, Front Immunol. 2017 Nov 29;8:1607. doi: 10.3389/fimmu.2017.01607. eCollection, 2017. PMID:29238341

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (583 Kb) [Save to disk]

Biological Unit Coordinates (5mh3.pdb1.gz) 98 Kb

Biological Unit Coordinates (5mh3.pdb2.gz) 99 Kb

Biological Unit Coordinates (5mh3.pdb3.gz) 99 Kb

Biological Unit Coordinates (5mh3.pdb4.gz) 99 Kb

Biological Unit Coordinates (5mh3.pdb5.gz) 98 Kb

Biological Unit Coordinates (5mh3.pdb6.gz) 99 Kb

Biological Unit Coordinates (5mh3.pdb7.gz) 99 Kb

Biological Unit Coordinates (5mh3.pdb8.gz) 98 Kb

LPC: Ligand-Protein Contacts for 5MH3

CSU: Contacts of Structural Units for 5MH3

Structure Factors (6119 Kb)

Retrieve 5MH3 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5MH3 from S2C, [Save to disk]

View 5MH3 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mh3_A] [5mh3_B] [5mh3_C] [5mh3_D] [5mh3_E] [5mh3_F] [5mh3_G] [5mh3_H] [5mh3_I] [5mh3_J] [5mh3_K] [5mh3_L]

SWISS-PROT database:

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