5MNK Hydrolase date Dec 13, 2016
title Cationic Trypsin In Complex With Benzylamine (Deuterated Sam K)
authors J.Schiebel, A.Heine, G.Klebe
compound source
Molecule: Cationic Trypsin
Chain: A
Synonym: Beta-Trypsin
Ec: 3.4.21.4
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
symmetry Space Group: P 21 21 21
R_factor 0.105 R_Free 0.117
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.710 58.168 66.807 90.00 90.00 90.00
method X-Ray Diffractionresolution 0.80 Å
ligand ABN, CA, SO4 enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (5mnk.pdb1.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 5MNK
  • CSU: Contacts of Structural Units for 5MNK
  • Structure Factors (1615 Kb)
  • Retrieve 5MNK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MNK from S2C, [Save to disk]
  • View 5MNK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5MNK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mnk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5MNK
  • Community annotation for 5MNK at PDBWiki (http://pdbwiki.org)

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