5N2L Transcription date Feb 07, 2017
title Crystal Structure Of The Second Bromodomain Of Human Brd2 In With A Tetrahydroquinoline Analogue
authors C.Tallant, P.J.Slavish, P.Siejka, N.Bharatham, W.R.Shadrick, S.Ch B.M.Young, V.A.Boyd, C.Heroven, H.J.Wiggers, S.Picaud, O.Fedorov T.Krojer, T.Chen, R.E.Lee, R.K.Guy, A.A.Shelat, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, S.Knapp, Structural Gen Consortium (Sgc)
compound source
Molecule: Bromodomain-Containing Protein 2
Chain: A, B, C, D
Synonym: O27.1.1,Really Interesting New Gene 3 Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brd2, Kiaa9001, Ring3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: C 1 2 1
R_factor 0.181 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
147.244 94.409 38.585 90.00 95.43 90.00
method X-Ray Diffractionresolution 1.89 Å
ligand 8J2, EDO, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (5n2l.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (5n2l.pdb2.gz) 41 Kb
  • Biological Unit Coordinates (5n2l.pdb3.gz) 41 Kb
  • Biological Unit Coordinates (5n2l.pdb4.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 5N2L
  • CSU: Contacts of Structural Units for 5N2L
  • Structure Factors (1183 Kb)
  • Retrieve 5N2L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N2L from S2C, [Save to disk]
    • View 5N2L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5N2L
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n2l_D] [5n2l_A] [5n2l_B] [5n2l_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5N2L
  • Community annotation for 5N2L at PDBWiki (http://pdbwiki.org)

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