5N7K Cell Adhesion date Feb 20, 2017
title Crystal Structure Of The Coiled-Coil Domain Of Human Tricell
authors A.Schuetz, U.Heinemann
compound source
Molecule: Marvel Domain-Containing Protein 2
Chain: A, B, C, D
Synonym: Tricellulin
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Marveld2, Tric
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.215 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.621 82.621 188.825 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.81 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystal structure of the tricellulin C-terminal coiled-coil domain reveals a unique mode of dimerization., Schuetz A, Radusheva V, Krug SM, Heinemann U, Ann N Y Acad Sci. 2017 Jun 29. doi: 10.1111/nyas.13408. PMID:28661558
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (167 Kb) [Save to disk]
  • Biological Unit Coordinates (5n7k.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (5n7k.pdb2.gz) 43 Kb
  • Biological Unit Coordinates (5n7k.pdb3.gz) 40 Kb
  • Biological Unit Coordinates (5n7k.pdb4.gz) 42 Kb
  • CSU: Contacts of Structural Units for 5N7K
  • Structure Factors (122 Kb)
  • Retrieve 5N7K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N7K from S2C, [Save to disk]
  • Re-refined 5n7k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5N7K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5N7K
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n7k_B] [5n7k_A] [5n7k_D] [5n7k_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5N7K
  • Community annotation for 5N7K at PDBWiki (http://pdbwiki.org)

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