5NDE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, GOL, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCyclobutanone Mimics of Intermediates in Metallo-beta-Lactamase Catalysis., Abboud MI, Kosmopoulou M, Krismanich A, Johnson JW, Hinchliffe P, Brem J, Claridge TDW, Spencer J, Schofield C, Dmitrienko GI, Chemistry. 2017 Dec 17. doi: 10.1002/chem.201705886. PMID:29250863
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (5nde.pdb1.gz) 87 Kb
  • Biological Unit Coordinates (5nde.pdb2.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 5NDE
  • CSU: Contacts of Structural Units for 5NDE
  • Structure Factors (3907 Kb)
  • Retrieve 5NDE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NDE from S2C, [Save to disk]
  • View 5NDE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nde_A] [5nde_B]
  • SWISS-PROT database:

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