5NJE Transferase date Mar 28, 2017
title The Structure Of The Polo-Box Domain (Pbd) Of Polo-Like Kina (Plk1) In Complex With Alpha-Bromo-3-Iodotoluene.
authors D.L.Kunciw, M.Rossmann, J.E.Stokes, C.De Fusco, D.R.Spring, M.Hyv
compound source
Molecule: Serinethreonine-Protein Kinase Plk1
Chain: A
Fragment: Polo-Box Domain, Unp Residues 371-603
Synonym: Polo-Like Kinase 1,Plk-1,Serinethreonine-Protein Stpk13;
Ec: 2.7.11.21
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Plk1, Plk
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.224 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.402 93.601 36.175 90.00 101.73 90.00
method X-Ray Diffractionresolution 1.98 Å
ligand 8Z5 enzyme Transferase E.C.2.7.11.21 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (5nje.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 5NJE
  • CSU: Contacts of Structural Units for 5NJE
  • Structure Factors (380 Kb)
  • Retrieve 5NJE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NJE from S2C, [Save to disk]
  • View 5NJE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NJE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nje_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NJE
  • Community annotation for 5NJE at PDBWiki (http://pdbwiki.org)

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