5NUJ Transport Protein date Apr 30, 2017
title Engineered Beta-Lactoglobulin: Variant I56f-L39a In Complex Chlorpromazine (Lg-Fa-Clp)
authors J.I.Loch, P.Bonarek, M.Tworzydlo, I.Lazinska, J.Szydlowska, K.Lew
compound source
Molecule: Beta-Lactoglobulin
Chain: A
Synonym: Beta-Lg
Engineered: Yes
Mutation: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Gene: Lgb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Origami B
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-Duet-1
symmetry Space Group: P 32 2 1
R_factor 0.224 R_Free 0.331
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.012 54.012 111.344 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.60 Å
ligand Z80 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe engineered beta-lactoglobulin with complementarity to the chlorpromazine chiral conformers., Loch JI, Bonarek P, Tworzydlo M, Lazinska I, Szydlowska J, Lipowska J, Rzesikowska K, Lewinski K, Int J Biol Macromol. 2018 Mar 16;114:85-96. doi: 10.1016/j.ijbiomac.2018.03.074. PMID:29555509
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (5nuj.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5NUJ
  • CSU: Contacts of Structural Units for 5NUJ
  • Structure Factors (166 Kb)
  • Retrieve 5NUJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NUJ from S2C, [Save to disk]
  • View 5NUJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NUJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5nuj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nuj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NUJ
  • Community annotation for 5NUJ at PDBWiki (http://pdbwiki.org)

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