5NVV | Ligase | date | May 04, 2017 |
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title | Pvhl:Elob:Eloc In Complex With (2s,4r)-4-Hydroxy-1-((S)-2-(2 Hydroxyacetamido)-3,3-Dimethylbutanoyl)-N-(4-(4-Methylthiaz Benzyl)Pyrrolidine-2-Carboxamide (Ligand 3) | ||||||||||||||
authors | M.S.Gadd, P.Soares, C.Galdeano, A.Ciulli | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Elongin-B Chain: A, D, G, J Synonym: Elob,Elongin 18 Kda Subunit,Rna Polymerase II Tran Factor Siii Subunit B,Siii P18,Transcription Elongation Fac Polypeptide 2; Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Elob, Tceb2 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdfduet-1 | ||||||||||||||
Molecule: Elongin-C Chain: B, E, H, K Synonym: Eloc,Elongin 15 Kda Subunit,Rna Polymerase II Tran Factor Siii Subunit C,Siii P15,Transcription Elongation Fac Polypeptide 1; Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eloc, Tceb1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdfduet-1 | ||||||||||||||
Molecule: Von Hippel-Lindau Disease Tumor Suppressor Chain: C, F, I, L Synonym: Protein G7,Pvhl Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vhl Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Phat4 | ||||||||||||||
symmetry | Space Group: P 41 2 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.10 Å | ||||||||||||
ligand | 9BT, CAS | enzyme |
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Gene Ontology |
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Primary reference | Group-Based Optimization of Potent and Cell-Active Inhibitors of the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase: Structure-Activity Relationships Leading to the Chemical Probe (2S,4R)-1-((S)-2-(1-Cyanocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxy -N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (VH298)., Soares P, Gadd MS, Frost J, Galdeano C, Ellis L, Epemolu O, Rocha S, Read KD, Ciulli A, J Med Chem. 2017 Sep 18. doi: 10.1021/acs.jmedchem.7b00675. PMID:28853884 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |