5NYW date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AZI, CL, EDO, PEG, SO4, UNX enzyme
Gene ERS008506
Gene
Ontology
ChainFunctionProcessComponent
L, Z, U, O, T, J, H, R, 2, Y, V, X, C, K, M, E, I, A, Q, P, D, F, G, B, N, S, 1, W


Primary referenceThe Y. bercovieri Anbu crystal structure sheds light on the evolution of highly (pseudo)symmetric multimers., Piasecka A, Czapinska H, Vielberg MT, Szczepanowski R, Kiefersauer R, Reed S, Groll M, Bochtler M, J Mol Biol. 2017 Dec 16. pii: S0022-2836(17)30590-9. doi:, 10.1016/j.jmb.2017.11.016. PMID:29258816
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2146 Kb) [Save to disk]
  • Biological Unit Coordinates (5nyw.pdb1.gz) 1072 Kb
  • Biological Unit Coordinates (5nyw.pdb2.gz) 1072 Kb
  • LPC: Ligand-Protein Contacts for 5NYW
  • CSU: Contacts of Structural Units for 5NYW
  • Structure Factors (2782 Kb)
  • Retrieve 5NYW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NYW from S2C, [Save to disk]
  • Re-refined 5nyw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5NYW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nyw_I] [5nyw] [5nyw_1] [5nyw_2] [5nyw_A] [5nyw_B] [5nyw_C] [5nyw_D] [5nyw_E] [5nyw_F] [5nyw_G] [5nyw_H] [5nyw_J] [5nyw_K] [5nyw_L] [5nyw_M] [5nyw_N] [5nyw_O] [5nyw_P] [5nyw_Q] [5nyw_R] [5nyw_S] [5nyw_T] [5nyw_U] [5nyw_V] [5nyw_W] [5nyw_X] [5nyw_Y] [5nyw_Z]
  • SWISS-PROT database:

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