5O9G Structure of nucleosome-Chd1 complex date
authors Farnung, L., Vos, S.M., Wigge, C., Cramer, P.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.80
ligand ADP, BEF enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E


C, G


F, B


H, D


W


Primary referenceNucleosome-Chd1 structure and implications for chromatin remodelling., Farnung L, Vos SM, Wigge C, Cramer P, Nature. 2017 Oct 11. doi: 10.1038/nature24046. PMID:29019976
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (377 Kb) [Save to disk]
  • Biological Unit Coordinates (5o9g.pdb1.gz) 367 Kb
  • LPC: Ligand-Protein Contacts for 5O9G
  • CSU: Contacts of Structural Units for 5O9G
  • Retrieve 5O9G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5O9G from S2C, [Save to disk]
    • View 5O9G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5O9G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5o9g from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5o9g_J] [5o9g_E] [5o9g_A] [5o9g_D] [5o9g_W] [5o9g_F] [5o9g_C] [5o9g_I] [5o9g_G] [5o9g_H] [5o9g_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5O9G
  • Community annotation for 5O9G at PDBWiki (http://pdbwiki.org)

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