5OAZ Transferase date Jun 25, 2017
title Crystal Structure Of The Abl-Sh3 Domain At Ph 7.5
authors A.Camara-Artigas
compound source
Molecule: Tyrosine-Protein Kinase Abl1
Chain: A, B
Fragment: Sh3 Domain
Synonym: Abelson Murine Leukemia Viral Oncogene Homolog 1,A Tyrosine-Protein Kinase 1,Proto-Oncogene C-Abl,P150;
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Abl1, Abl, Jtk7
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 32
R_factor 0.145 R_Free 0.163
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.919 49.919 45.046 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.03 Å
ligand PEG enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (5oaz.pdb1.gz) 29 Kb
  • Biological Unit Coordinates (5oaz.pdb2.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 5OAZ
  • CSU: Contacts of Structural Units for 5OAZ
  • Structure Factors (2228 Kb)
  • Retrieve 5OAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OAZ from S2C, [Save to disk]
  • Re-refined 5oaz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5OAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OAZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5oaz_A] [5oaz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OAZ
  • Community annotation for 5OAZ at PDBWiki (http://pdbwiki.org)

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