5OCA		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NA, TWA, TWD	enzyme
Gene Ontology	Chain Function Process Component B
Primary reference	Heparan sulfate proteoglycans present PCSK9 to the LDL receptor., Gustafsen C, Olsen D, Vilstrup J, Lund S, Reinhardt A, Wellner N, Larsen T, Andersen CBF, Weyer K, Li JP, Seeberger PH, Thirup S, Madsen P, Glerup S, Nat Commun. 2017 Sep 11;8(1):503. doi: 10.1038/s41467-017-00568-7. PMID:28894089

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk] Biological Unit Coordinates (5oca.pdb1.gz) 170 Kb LPC: Ligand-Protein Contacts for 5OCA CSU: Contacts of Structural Units for 5OCA Structure Factors (911 Kb) Retrieve 5OCA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5OCA from S2C, [Save to disk]

View 5OCA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5oca_A] [5oca_B] [5oca_H] [5oca_L] SWISS-PROT database:

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OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

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