5OEO Membrane Protein date Jul 09, 2017
title Solution Structure Of The Complex Of Trpv5(655-725) With A C E32qe68q Double Mutant
authors G.W.Vuister, F.M.Bokhovchuk, N.Bate, N.Kovalevskaya, B.T.Goult, C.A.E.M.Spronk
compound source
Molecule: Calmodulin-1
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Calm1, Calm, Cam, Cam1
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693

Molecule: Transient Receptor Potential Cation Channel Subfa Member 5;
Chain: C
Synonym: Trpv5,Calcium Transport Protein 2,Cat2,Epithelial Channel 1,Ecac1,Osm-9-Like Trp Channel 3,Otrpc3;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trpv5, Ecac1
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


C


Primary referenceThe Structural Basis of Calcium-Dependent Inactivation of the Transient Receptor Potential Vanilloid 5 Channel., Bokhovchuk FM, Bate N, Kovalevskaya NV, Goult BT, Spronk CAEM, Vuister GW, Biochemistry. 2018 Apr 20. doi: 10.1021/acs.biochem.7b01287. PMID:29584409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1133 Kb) [Save to disk]
  • Biological Unit Coordinates (5oeo.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 5OEO
  • CSU: Contacts of Structural Units for 5OEO
  • Original NMR restraints for 5OEO from PDB
  • Retrieve 5OEO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OEO from S2C, [Save to disk]
    • View 5OEO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5OEO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5oeo_C] [5oeo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5OEO
  • Community annotation for 5OEO at PDBWiki (http://pdbwiki.org)

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