5OOD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9ZK, ADP, HIC, MG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, C, A, D, B


Primary referenceStructural transitions of F-actin upon ATP hydrolysis at near-atomic resolution revealed by cryo-EM., Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S, Nat Struct Mol Biol. 2018 Jun;25(6):528-537. doi: 10.1038/s41594-018-0074-0. Epub, 2018 Jun 4. PMID:29867215
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • Biological Unit Coordinates (5ood.pdb1.gz) 295 Kb
  • LPC: Ligand-Protein Contacts for 5OOD
  • CSU: Contacts of Structural Units for 5OOD
  • Retrieve 5OOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OOD from S2C, [Save to disk]
  • View 5OOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ood_A] [5ood_B] [5ood_C] [5ood_D] [5ood_E]
  • SWISS-PROT database:

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