5ORP Transferase date Aug 16, 2017
title Crystal Structure Of Aurora-A Kinase In Complex With An Allo Binding Fragment
authors P.J.Mcintyre, P.M.Collins, F.Von Delft, R.Bayliss
compound source
Molecule: Aurora Kinase A
Chain: A
Synonym: Aurora 2,Auroraipl1-Related Kinase 1,Hark1,Breast Amplified Kinase,Serinethreonine-Protein Kinase 15,Serine Protein Kinase 6,Serinethreonine-Protein Kinase Aurora-A;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aurka, Aik, Airk1, Ark1, Aura, Ayk1, Btak, Iak1, Stk1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.207 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.060 82.060 174.910 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.19 Å
ligand A5K, ADP, MG, TPO enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCharacterization of Three Druggable Hot-Spots in the Aurora-A/TPX2 Interaction Using Biochemical, Biophysical, and Fragment-Based Approaches., McIntyre PJ, Collins PM, Vrzal L, Birchall K, Arnold LH, Mpamhanga C, Coombs PJ, Burgess SG, Richards MW, Winter A, Veverka V, Delft FV, Merritt A, Bayliss R, ACS Chem Biol. 2017 Oct 30. doi: 10.1021/acschembio.7b00537. PMID:29045126
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (5orp.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 5ORP
  • CSU: Contacts of Structural Units for 5ORP
  • Structure Factors (518 Kb)
  • Retrieve 5ORP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ORP from S2C, [Save to disk]
  • View 5ORP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ORP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5orp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ORP
  • Community annotation for 5ORP at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science