5OVV	Protein Binding	date	Aug 29, 2017
title	Pdz Domain From Rat Shank3 Bound To The C Terminus Of Prosap
authors	S.K.Ponna, M.Myllykoski, T.M.Boeckers, P.Kursula
compound		source
Molecule: Sh3 And Multiple Ankyrin Repeat Domains Protein 3 Chain: A Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Shank3 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Leucine Zipper Putative Tumor Suppressor 3 Chain: B Synonym: Prosap-Interacting Protein 1,Prosapip1 Engineered: Yes		Synthetic: Yes Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116
symmetry	Space Group: C 2 2 21	R_factor 0.155 R_Free 0.197
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.570 85.910 46.060 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	ACE, SCN	enzyme
Primary reference	Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3., Ponna SK, Ruskamo S, Myllykoski M, Keller C, Boeckers TM, Kursula P, J Neurochem. 2018 Feb 23. doi: 10.1111/jnc.14322. PMID:29473168

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (5ovv.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 5OVV CSU: Contacts of Structural Units for 5OVV Structure Factors (450 Kb) Retrieve 5OVV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5OVV from S2C, [Save to disk]

View 5OVV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5OVV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ovv_A] [5ovv_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5OVV

Community annotation for 5OVV at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---