5R4G Transcription date Feb 24, 2020
title Pandda Analysis Group Deposition -- Crystal Structure Of The Bromodomain Of Human Nucleosome-Remodeling Factor Subunit B Complex With Fmopl000621a
authors R.Talon, T.Krojer, M.Fairhead, R.Sethi, A.R.Bradley, A.Aimon, P.Co J.Brandao-Neto, A.Douangamath, N.Wright, E.Maclean, Z.Renjie, A. P.E.Brennan, C.Bountra, C.H.Arrowsmith, A.Edwards, F.Von Delft
compound source
Molecule: Nucleosome-Remodeling Factor Subunit Bptf
Chain: A
Synonym: Bromodomain And Phd Finger-Containing Transcriptio Fetal Alz-50 Clone 1 Protein,Fetal Alzheimer Antigen;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bptf, Fac1, Falz
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.184 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.416 27.464 38.423 90.00 96.37 90.00
method X-Ray Diffractionresolution 1.25 Å
ligand DMS, RU4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (5r4g.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 5R4G
  • CSU: Contacts of Structural Units for 5R4G
  • Structure Factors (3395 Kb)
  • Retrieve 5R4G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5R4G from S2C, [Save to disk]
  • View 5R4G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5R4G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5r4g_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5R4G
  • Community annotation for 5R4G at PDBWiki (http://pdbwiki.org)

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