5REI Hydrolase Hydrolase Inhibitor date Mar 15, 2020
title Pandda Analysis Group Deposition -- Crystal Structure Of Sar Main Protease In Complex With Z2856434856
authors D.Fearon, C.D.Owen, A.Douangamath, P.Lukacik, A.J.Powell, C.M.Str Damerell, E.Resnick, T.Krojer, P.Gehrtz, C.Wild, A.Aimon, J.Brand A.Carbery, L.Dunnett, R.Skyner, M.Snee, N.London, M.A.Walsh, F.Vo
compound source
Molecule: 3c-Like Proteinase
Chain: A
Synonym: Sars-Cov-2 Main Protease,3cl-Pro,3clp,Main Proteas Non-Structural Protein 5,Nsp5,Sars Coronavirus Main Protein
Ec: 3.4.22.69
Engineered: Yes
 Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov
Organism_taxid: 2697049
Gene: Rep, 1a-1b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.183 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.646 53.228 44.405 90.00 102.99 90.00
method X-Ray Diffractionresolution 1.82 Å
ligand DMS, T1S enzyme Hydrolase E.C.3.4.22.69 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (5rei.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 5REI
  • CSU: Contacts of Structural Units for 5REI
  • Structure Factors (1760 Kb)
  • Retrieve 5REI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5REI from S2C, [Save to disk]
    • View 5REI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5REI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5rei_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5REI
  • Community annotation for 5REI at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science