5SYP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructural and Biochemical Characterization of Spa47 Provides Mechanistic Insight into Type III Secretion System ATPase Activation and Shigella Virulence Regulation., Burgess JL, Burgess RA, Morales Y, Bouvang JM, Johnson SJ, Dickenson NE, J Biol Chem. 2016 Oct 21. pii: jbc.M116.755256. PMID:27770024
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (236 Kb) [Save to disk]
  • Biological Unit Coordinates (5syp.pdb1.gz) 119 Kb
  • Biological Unit Coordinates (5syp.pdb2.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 5SYP
  • CSU: Contacts of Structural Units for 5SYP
  • Structure Factors (486 Kb)
  • Retrieve 5SYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5SYP from S2C, [Save to disk]
  • Re-refined 5syp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5SYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5syp] [5syp_A] [5syp_B]
  • SWISS-PROT database:
  • Domain found in 5SYP: [AAA ] by SMART

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