5T1W	Hydrolase Hydrolase Inhibitor	date	Aug 22, 2016
title	Aminomethyl-Derived Beta Secretase (Bace1) Inhibitors: Engag Without An Anilide Functionality
authors	K.D.Parris, F.Vajdos
compound		source
Molecule: Beta-Secretase 1 Chain: A Fragment: Unp Residues 46-454 Synonym: Aspartyl Protease 2,Asp 2,Beta-Site Amyloid Precur Protein Cleaving Enzyme 1,Beta-Site App Cleaving Enzyme 1,M Membrane-Associated Aspartic Protease 2; Ec: 3.4.23.46 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bace1, Bace, Kiaa1149 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 61 2 2	R_factor 0.178 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 101.460 101.460 170.660 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.96 Å
ligand	74B, CL, DMS, GOL, IOD, NA	enzyme	Hydrolase E.C.3.4.23.46 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Aminomethyl-Derived Beta Secretase (BACE1) Inhibitors: Engaging Gly230 without an Anilide Functionality., Butler CR, Ogilvie K, Martinez-Alsina L, Barreiro G, Beck EM, Nolan CE, Atchison K, Benvenuti E, Buzon L, Doran S, Gonzales C, Helal CJ, Hou X, Hsu MH, Johnson EF, Lapham K, Lanyon L, Parris K, O'Neill BT, Riddell D, Robshaw A, Vajdos F, Brodney MA, J Med Chem. 2017 Jan 12;60(1):386-402. doi: 10.1021/acs.jmedchem.6b01451. Epub, 2016 Dec 20. PMID:27997172

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (5t1w.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 5T1W CSU: Contacts of Structural Units for 5T1W Structure Factors (312 Kb) Retrieve 5T1W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5T1W from S2C, [Save to disk] Re-refined 5t1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5T1W

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5t1w] [5t1w_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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