5T3Z date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FUC, GAL, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


G


Primary referenceNatively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site., Gristick HB, von Boehmer L, West AP Jr, Schamber M, Gazumyan A, Golijanin J, Seaman MS, Fatkenheuer G, Klein F, Nussenzweig MC, Bjorkman PJ, Nat Struct Mol Biol. 2016 Sep 12. doi: 10.1038/nsmb.3291. PMID:27617431
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (525 Kb) [Save to disk]
  • Biological Unit Coordinates (5t3z.pdb1.gz) 1504 Kb
  • LPC: Ligand-Protein Contacts for 5T3Z
  • CSU: Contacts of Structural Units for 5T3Z
  • Structure Factors (741 Kb)
  • Retrieve 5T3Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T3Z from S2C, [Save to disk]
  • Re-refined 5t3z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5T3Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t3z] [5t3z_B] [5t3z_D] [5t3z_E] [5t3z_G] [5t3z_H] [5t3z_L]
  • SWISS-PROT database:
  • Domains found in 5T3Z: [IG_like] [IGv ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science