5T4F date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 75M, NA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • virus receptor activity
  • chemorepellent activity


  • Primary referenceScaffold-hopping from xanthines to tricyclic guanines: A case study of dipeptidyl peptidase 4 (DPP4) inhibitors., Pissarnitski DA, Zhao Z, Cole D, Wu WL, Domalski M, Clader JW, Scapin G, Voigt J, Soriano A, Kelly T, Powles MA, Yao Z, Burnett DA, Bioorg Med Chem. 2016 Sep 4. pii: S0968-0896(16)30694-0. doi:, 10.1016/j.bmc.2016.09.007. PMID:27670099
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk]
  • Biological Unit Coordinates (5t4f.pdb1.gz) 281 Kb
  • LPC: Ligand-Protein Contacts for 5T4F
  • CSU: Contacts of Structural Units for 5T4F
  • Structure Factors (4469 Kb)
  • Retrieve 5T4F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T4F from S2C, [Save to disk]
  • Re-refined 5t4f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5T4F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t4f] [5t4f_A] [5t4f_B]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science