5T8Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B12, PO4, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular basis of cobalamin-dependent RNA modification., Dowling DP, Miles ZD, Kohrer C, Maiocco SJ, Elliott SJ, Bandarian V, Drennan CL, Nucleic Acids Res. 2016 Sep 15. pii: gkw806. PMID:27638883
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]
  • Biological Unit Coordinates (5t8y.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (5t8y.pdb2.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 5T8Y
  • CSU: Contacts of Structural Units for 5T8Y
  • Structure Factors (151 Kb)
  • Retrieve 5T8Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T8Y from S2C, [Save to disk]
  • Re-refined 5t8y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5T8Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t8y] [5t8y_A] [5t8y_B] [5t8y_X]
  • SWISS-PROT database:
  • Domain found in 5T8Y: [EZ_HEAT ] by SMART

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