OCA Atlas for 5T9U

5T9U

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

7HG

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, B, C, D

Primary reference

Discovery of Potent Cyclophilin Inhibitors based on Structural Simplification of Sanglifehrin A., Steadman VA, Pettit SB, Poullennec KG, Lazarides L, Keats AJ, Dean DK, Stanway SJ, Austin CA, Sanvoisin JA, Watt GM, Fliri HG, Liclican AC, Jin D, Wong MH, Leavitt SA, Lee YJ, Tian Y, Frey CR, Appleby TC, Schmitz U, Jansa P, Mackman RL, Schultz BE, J Med Chem. 2017 Jan 11. doi: 10.1021/acs.jmedchem.6b01329. PMID:28075591

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]

Biological Unit Coordinates (5t9u.pdb1.gz) 31 Kb

Biological Unit Coordinates (5t9u.pdb2.gz) 30 Kb

Biological Unit Coordinates (5t9u.pdb3.gz) 31 Kb

Biological Unit Coordinates (5t9u.pdb4.gz) 32 Kb

LPC: Ligand-Protein Contacts for 5T9U

CSU: Contacts of Structural Units for 5T9U

Structure Factors (465 Kb)

Retrieve 5T9U in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5T9U from S2C, [Save to disk]

Re-refined 5t9u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5T9U in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5t9u] [5t9u_A] [5t9u_B] [5t9u_C] [5t9u_D]

SWISS-PROT database:

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]