OCA Atlas for 5TBD

5TBD

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACE, NH2

enzyme

Primary reference

Structure and Characterisation of a Key Epitope in the Conserved C-Terminal Domain of the Malaria Vaccine Candidate MSP2., Seow J, Morales RA, MacRaild CA, Krishnarjuna B, McGowan S, Dingjan T, Jaipuria G, Rouet R, Wilde KL, Atreya HS, Richards JS, Anders RF, Christ D, Drinkwater N, Norton RS, J Mol Biol. 2017 Feb 8. pii: S0022-2836(17)30067-0. doi:, 10.1016/j.jmb.2017.02.003. PMID:28189425

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk]

Biological Unit Coordinates (5tbd.pdb1.gz) 77 Kb

Biological Unit Coordinates (5tbd.pdb2.gz) 76 Kb

Biological Unit Coordinates (5tbd.pdb3.gz) 77 Kb

Biological Unit Coordinates (5tbd.pdb4.gz) 76 Kb

LPC: Ligand-Protein Contacts for 5TBD

CSU: Contacts of Structural Units for 5TBD

Structure Factors (3382 Kb)

Retrieve 5TBD in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5TBD from S2C, [Save to disk]

Re-refined 5tbd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TBD in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tbd] [5tbd_A] [5tbd_B] [5tbd_C] [5tbd_D] [5tbd_E] [5tbd_F] [5tbd_G] [5tbd_H] [5tbd_I] [5tbd_J] [5tbd_K] [5tbd_L]

SWISS-PROT database:

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