5TEF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, GTG, UNX enzyme
Primary referenceStructural insights into Gemin5-guided selection of pre-snRNAs for snRNP assembly., Xu C, Ishikawa H, Izumikawa K, Li L, He H, Nobe Y, Yamauchi Y, Shahjee HM, Wu XH, Yu YT, Isobe T, Takahashi N, Min J, Genes Dev. 2016 Nov 1;30(21):2376-2390. Epub 2016 Nov 10. PMID:27881600
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (5tef.pdb1.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 5TEF
  • CSU: Contacts of Structural Units for 5TEF
  • Structure Factors (6481 Kb)
  • Retrieve 5TEF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TEF from S2C, [Save to disk]
  • Re-refined 5tef structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TEF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tef] [5tef_A]
  • SWISS-PROT database:
  • Domain found in 5TEF: [WD40 ] by SMART

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