OCA Atlas for 5TFT

5TFT

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

HEM, P6U, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, B, A, D

Primary reference

Aminomethyl-Derived Beta Secretase (BACE1) Inhibitors: Engaging Gly230 without an Anilide Functionality., Butler CR, Ogilvie K, Martinez-Alsina L, Barreiro G, Beck EM, Nolan CE, Atchison K, Benvenuti E, Buzon L, Doran S, Gonzales C, Helal CJ, Hou X, Hsu MH, Johnson EF, Lapham K, Lanyon L, Parris K, O'Neill BT, Riddell D, Robshaw A, Vajdos F, Brodney MA, J Med Chem. 2017 Jan 12;60(1):386-402. doi: 10.1021/acs.jmedchem.6b01451. Epub, 2016 Dec 20. PMID:27997172

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]

Biological Unit Coordinates (5tft.pdb1.gz) 79 Kb

Biological Unit Coordinates (5tft.pdb2.gz) 78 Kb

Biological Unit Coordinates (5tft.pdb3.gz) 76 Kb

Biological Unit Coordinates (5tft.pdb4.gz) 77 Kb

LPC: Ligand-Protein Contacts for 5TFT

CSU: Contacts of Structural Units for 5TFT

Structure Factors (1296 Kb)

Retrieve 5TFT in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5TFT from S2C, [Save to disk]

Re-refined 5tft structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TFT in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tft_C] [5tft_D] [5tft] [5tft_A] [5tft_B]

SWISS-PROT database:

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