5TKD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 7GL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIdentification of imidazo[1,2-b]pyridazine TYK2 pseudokinase ligands as potent and selective allosteric inhibitors of TYK2 signalling., Moslin R, Gardner D, Santella J, Zhang Y, Duncia JV, Liu C, Lin J, Tokarski JS, Strnad J, Pedicord D, Chen J, Blat Y, Zupa-Fernandez A, Cheng L, Sun H, Chaudhry C, Huang C, D'Arienzo C, Sack JS, Muckelbauer JK, Chang C, Tredup J, Xie D, Aranibar N, Burke JR, Carter PH, Weinstein DS, Medchemcomm. 2016 Dec 15;8(4):700-712. doi: 10.1039/c6md00560h. eCollection 2017 , Apr 1. PMID:30108788
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (5tkd.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (5tkd.pdb2.gz) 42 Kb
  • Biological Unit Coordinates (5tkd.pdb3.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 5TKD
  • CSU: Contacts of Structural Units for 5TKD
  • Structure Factors (3071 Kb)
  • Retrieve 5TKD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TKD from S2C, [Save to disk]
  • Re-refined 5tkd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TKD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tkd] [5tkd_A] [5tkd_B]
  • SWISS-PROT database:

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