OCA Atlas for 5TKF

5TKF

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CU, MAN, NAG, OXY

enzyme

Gene

GE21DRAFT

Gene
Ontology

Chain	Function	Process	Component
B, C, A, D	monooxygenase activity

Primary reference

Crystallization of a fungal lytic polysaccharide monooxygenase expressed from glycoengineered Pichia pastoris for X-ray and neutron diffraction., O'Dell WB, Swartz PD, Weiss KL, Meilleur F, Acta Crystallogr F Struct Biol Commun. 2017 Feb 1;73(Pt 2):70-78. doi:, 10.1107/S2053230X16020318. Epub 2017 Jan 19. PMID:28177316

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (434 Kb) [Save to disk]

Biological Unit Coordinates (5tkf.pdb1.gz) 109 Kb

Biological Unit Coordinates (5tkf.pdb2.gz) 106 Kb

Biological Unit Coordinates (5tkf.pdb3.gz) 106 Kb

Biological Unit Coordinates (5tkf.pdb4.gz) 105 Kb

Biological Unit Coordinates (5tkf.pdb5.gz) 212 Kb

Biological Unit Coordinates (5tkf.pdb6.gz) 209 Kb

LPC: Ligand-Protein Contacts for 5TKF

CSU: Contacts of Structural Units for 5TKF

Structure Factors (1010 Kb)

Retrieve 5TKF in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5TKF from S2C, [Save to disk]

Re-refined 5tkf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TKF in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tkf] [5tkf_A] [5tkf_B] [5tkf_C] [5tkf_D]

SWISS-PROT database:

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