5TPY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	HEZ, MG	enzyme
Primary reference	Zika virus produces noncoding RNAs using a multi-pseudoknot structure that confounds a cellular exonuclease., Akiyama BM, Laurence HM, Massey AR, Costantino DA, Xie X, Yang Y, Shi PY, Nix JC, Beckham JD, Kieft JS, Science. 2016 Dec 2;354(6316):1148-1152. Epub 2016 Nov 10. PMID:27934765

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (5tpy.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 5TPY CSU: Contacts of Structural Units for 5TPY Structure Factors (224 Kb) Retrieve 5TPY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TPY from S2C, [Save to disk] Re-refined 5tpy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TPY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tpy] [5tpy_A] SWISS-PROT database:

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