5TUD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ERM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D


Primary referenceStructural insights into the extracellular recognition of the human serotonin 2B receptor by an antibody., Ishchenko A, Wacker D, Kapoor M, Zhang A, Han GW, Basu S, Patel N, Messerschmidt M, Weierstall U, Liu W, Katritch V, Roth BL, Stevens RC, Cherezov V, Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8223-8228. doi:, 10.1073/pnas.1700891114. Epub 2017 Jul 17. PMID:28716900
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (527 Kb) [Save to disk]
  • Biological Unit Coordinates (5tud.pdb1.gz) 262 Kb
  • Biological Unit Coordinates (5tud.pdb2.gz) 261 Kb
  • LPC: Ligand-Protein Contacts for 5TUD
  • CSU: Contacts of Structural Units for 5TUD
  • Structure Factors (389 Kb)
  • Retrieve 5TUD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TUD from S2C, [Save to disk]
  • Re-refined 5tud structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TUD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tud_A] [5tud_B] [5tud_C] [5tud_D] [5tud_E] [5tud_F]
  • SWISS-PROT database:

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