5TVC Acetylcholine-Binding Protein date Nov 08, 2016
title Crystal Structure Of A Chimeric Acetylcholine Binding Protei Aplysia Californica (Ac-Achbp) Containing Loop C From The H Nicotinic Acetylcholine Receptor In Complex With (E,2s)-N (5-Phenoxy-3-Pyridyl)Pent-4-En-2-Amine (Ti-5312)
authors J.Bobango, J.Wu, I.T.Talley, T.T.Talley
compound source
Molecule: Soluble Acetylcholine Receptor,Neuronal Acetylcho Receptor Subunit Alpha-3 Chimera;
Chain: A, B, C, D, E
Fragment: Unp Residues 18-198 + 215-236 From Aplysia Califo Linked By Loop C (Unp Residues 215-230) From Homo Sapiens;
Engineered: Yes
Organism_scientific: Aplysia Californica, Homo Sapiens
Organism_common: California Sea Hare, Human
Organism_taxid: 6500, 9606
Gene: Chrna3, Nachra3
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.189 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.854 78.040 120.569 90.00 95.03 90.00
method X-Ray Diffractionresolution 1.93 Å
ligand 1PE, 7LB, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (5tvc.pdb1.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 5TVC
  • CSU: Contacts of Structural Units for 5TVC
  • Structure Factors (2557 Kb)
  • Retrieve 5TVC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TVC from S2C, [Save to disk]
  • Re-refined 5tvc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TVC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TVC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tvc_B] [5tvc] [5tvc_E] [5tvc_D] [5tvc_C] [5tvc_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TVC
  • Community annotation for 5TVC at PDBWiki (http://pdbwiki.org)

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