5TXX	DNA Polymerase Mu Pre-Catalytic Ground State Ternary Complex, Ca2+	date
authors	Jamsen, J.A., Wilson, S.H.
compound		source
symmetry		R_factor R_Free 0.1951
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.95
ligand	CA, EDO, EPE, NA, TTP	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Time-lapse crystallography snapshots of a double-strand break repair polymerase in action., Jamsen JA, Beard WA, Pedersen LC, Shock DD, Moon AF, Krahn JM, Bebenek K, Kunkel TA, Wilson SH, Nat Commun. 2017 Aug 15;8(1):253. doi: 10.1038/s41467-017-00271-7. PMID:28811466

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk] Biological Unit Coordinates (5txx.pdb1.gz) 72 Kb LPC: Ligand-Protein Contacts for 5TXX CSU: Contacts of Structural Units for 5TXX Structure Factors (851 Kb) Retrieve 5TXX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TXX from S2C, [Save to disk]

View 5TXX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5TXX

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5txx from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5txx_A] [5txx_P] [5txx_D] [5txx_T] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5TXX

Community annotation for 5TXX at PDBWiki (http://pdbwiki.org)

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