5U07 CRISPR RNA-guided surveillance complex date
authors Xiao, Y., Luo, M., Hayes, R.P., Kim, J., Ng, S., Ding, F., Liao, M., Ke, A.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.80
Gene
Ontology
ChainFunctionProcessComponent
J, B


N


Primary referenceStructure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System., Xiao Y, Luo M, Hayes RP, Kim J, Ng S, Ding F, Liao M, Ke A, Cell. 2017 Jun 29;170(1):48-60.e11. doi: 10.1016/j.cell.2017.06.012. PMID:28666122
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (505 Kb) [Save to disk]
  • Biological Unit Coordinates (5u07.pdb1.gz) 498 Kb
  • CSU: Contacts of Structural Units for 5U07
  • Retrieve 5U07 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U07 from S2C, [Save to disk]
  • View 5U07 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5U07
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5u07 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u07_O] [5u07_G] [5u07_A] [5u07_B] [5u07_F] [5u07_I] [5u07_E] [5u07_M] [5u07_H] [5u07_D] [5u07_K] [5u07_J] [5u07_N] [5u07_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5U07
  • Community annotation for 5U07 at PDBWiki (http://pdbwiki.org)

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