5U4L date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, EDO, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUsing homology modeling to interrogate binding affinity in neutralization of ricin toxin by a family of single domain antibodies., Bazzoli A, Vance DJ, Rudolph MJ, Rong Y, Angalakurthi SK, Toth RT 4th, Middaugh CR, Volkin DB, Weis DD, Karanicolas J, Mantis NJ, Proteins. 2017 Nov;85(11):1994-2008. doi: 10.1002/prot.25353. Epub 2017 Aug 4. PMID:28718923
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]
  • Biological Unit Coordinates (5u4l.pdb1.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 5U4L
  • CSU: Contacts of Structural Units for 5U4L
  • Structure Factors (180 Kb)
  • Retrieve 5U4L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U4L from S2C, [Save to disk]
  • View 5U4L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u4l_A] [5u4l_B]
  • SWISS-PROT database:

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