5UAN	Transcription Dna	date	Dec 19, 2016
title	Crystal Structure Of Multi-Domain Rar-Beta-Rxr-Alpha Heterod Dna
authors	V.Chandra, D.Wu, Y.Kim, F.Rastinejad
compound		source
Molecule: Retinoic Acid Receptor Rxr-Alpha Chain: A Fragment: Unp Residues 98-462 Synonym: Nuclear Receptor Subfamily 2 Group B Member 1,Reti Receptor Alpha; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rxra, Nr2b1 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Retinoic Acid Receptor Beta Chain: B Fragment: Unp Residues 98-462 Synonym: Rar-Beta,Hbv-Activated Protein,Nuclear Receptor Su Group B Member 2,Rar-Epsilon; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rarb, Hap, Nr1b2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Nuclear Receptor Coactivator 2 Chain: C, D Fragment: Unp Residues 687-696 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Dna (5'- D(Cptpapgpgptpcpapapapgpgptpcpapgpc)-3'); Chain: E Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Dna (5'- D(Gpcptpgpapcpcptptptpgpapcpcptpapg)-3'); Chain: F Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.221 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.470 77.403 112.113 90.00 90.37 90.00
method	X-Ray Diffraction	resolution	3.51 Å
ligand	9CR, REA, ZN	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	The quaternary architecture of RARbeta-RXRalpha heterodimer facilitates domain-domain signal transmission., Chandra V, Wu D, Li S, Potluri N, Kim Y, Rastinejad F, Nat Commun. 2017 Oct 11;8(1):868. doi: 10.1038/s41467-017-00981-y. PMID:29021580

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (239 Kb) [Save to disk] Biological Unit Coordinates (5uan.pdb1.gz) 233 Kb LPC: Ligand-Protein Contacts for 5UAN CSU: Contacts of Structural Units for 5UAN Structure Factors (91 Kb) Retrieve 5UAN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UAN from S2C, [Save to disk]

View 5UAN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5UAN

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5uan_E] [5uan_A] [5uan_D] [5uan_F] [5uan_C] [5uan_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5UAN

Community annotation for 5UAN at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---