5UAW Oxidoreductase date Dec 20, 2016
title Structure Of Apo Human Pycr-1 Crystallized In Space Group P2
authors J.J.Tanner
compound source
Molecule: Pyrroline-5-Carboxylate Reductase 1, Mitochondria
Chain: A, B, C, D, E
Fragment: Residues 1-300
Synonym: P5cr 1
Ec: 1.5.1.2
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pycr1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.181 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
163.030 88.140 117.320 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand SO4 enzyme Oxidoreductase E.C.1.5.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceResolving the Cofactor Binding Site in the Proline Biosynthetic Enzyme Human Pyrroline-5-Carboxylate Reductase 1., Christensen EM, Patel SM, Korasick DA, Campbell AC, Krause KL, Becker DF, Tanner JJ, J Biol Chem. 2017 Mar 3. pii: jbc.M117.780288. doi: 10.1074/jbc.M117.780288. PMID:28258219
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk]
  • Biological Unit Coordinates (5uaw.pdb1.gz) 850 Kb
  • Biological Unit Coordinates (5uaw.pdb2.gz) 171 Kb
  • Biological Unit Coordinates (5uaw.pdb3.gz) 175 Kb
  • Biological Unit Coordinates (5uaw.pdb4.gz) 174 Kb
  • LPC: Ligand-Protein Contacts for 5UAW
  • CSU: Contacts of Structural Units for 5UAW
  • Structure Factors (1055 Kb)
  • Retrieve 5UAW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UAW from S2C, [Save to disk]
  • Re-refined 5uaw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5UAW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5UAW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5uaw_A] [5uaw_E] [5uaw] [5uaw_C] [5uaw_D] [5uaw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5UAW
  • Community annotation for 5UAW at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science