5UFS	Hormone Receptor	date	Jan 05, 2017
title	X-Ray Crystal Structure Of The Ancestral Glucocorticoid Rece Ligand Binding Domain In Complex With Triamcinolone Acetoni Coregulator Fragment
authors	E.R.Weikum, E.A.Ortlund
compound		source
Molecule: Ancestral Glucocorticoid Receptor2 Chain: A, B Fragment: Ligand Binding Domain Engineered: Yes		Organism_scientific: Unidentified Organism_taxid: 32644 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Shp Nr Box 1 Peptide Chain: C, D Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: C 1 2 1	R_factor 0.215 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.027 52.829 126.010 90.00 101.78 90.00
method	X-Ray Diffraction	resolution	2.12 Å
ligand	1TA	enzyme
Primary reference	Structural analysis of the glucocorticoid receptor ligand-binding domain in complex with triamcinolone acetonide and a fragment of the atypical coregulator, SHP., Weikum ER, Okafor DC, D'Agostino EH, Colucci JK, Ortlund EA, Mol Pharmacol. 2017 Apr 10. pii: mol.117.108506. doi: 10.1124/mol.117.108506. PMID:28396564

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (271 Kb) [Save to disk] Biological Unit Coordinates (5ufs.pdb1.gz) 133 Kb Biological Unit Coordinates (5ufs.pdb2.gz) 132 Kb LPC: Ligand-Protein Contacts for 5UFS CSU: Contacts of Structural Units for 5UFS Structure Factors (228 Kb) Retrieve 5UFS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UFS from S2C, [Save to disk] Re-refined 5ufs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5UFS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5UFS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ufs_C] [5ufs] [5ufs_A] [5ufs_D] [5ufs_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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