5UH7 Transcription date Jan 11, 2017
title Crystal Structure Of Beta'Mtbsi Of Mycobacterium Tuberculosi Polymerase
authors W.Lin, K.Das, Y.Feng, R.H.Ebright
compound source
Molecule: Dna-Directed Rna Polymerase Subunit Beta'
Chain: A, B
Synonym: Rnap Subunit Beta',Rna Polymerase Subunit Beta', Transcriptase Subunit Beta';
Ec: 2.7.7.6
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis (Strain Atc H37rv);
Organism_taxid: 83332
Strain: Atcc 25618 H37rv
Gene: Rpoc, Rv0668, Mtci376.07c
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 1 21 1
R_factor 0.220 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.753 97.500 53.741 90.00 93.30 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Transferase E.C.2.7.7.6 BRENDA
Primary referenceStructural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition., Lin W, Mandal S, Degen D, Liu Y, Ebright YW, Li S, Feng Y, Zhang Y, Mandal S, Jiang Y, Liu S, Gigliotti M, Talaue M, Connell N, Das K, Arnold E, Ebright RH, Mol Cell. 2017 Apr 20;66(2):169-179.e8. doi: 10.1016/j.molcel.2017.03.001. Epub, 2017 Apr 6. PMID:28392175
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (5uh7.pdb1.gz) 90 Kb
  • CSU: Contacts of Structural Units for 5UH7
  • Structure Factors (219 Kb)
  • Retrieve 5UH7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UH7 from S2C, [Save to disk]
  • Re-refined 5uh7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5UH7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UH7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5uh7_B] [5uh7] [5uh7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UH7
  • Community annotation for 5UH7 at PDBWiki (http://pdbwiki.org)

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