OCA Atlas for 5UK4

5UK4

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
G, D, B, Q, F, A, J, H, L, K, E, R, S, P, I, N, C, T, M, O

Primary reference

Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication., Hanke L, Schmidt FI, Knockenhauer KE, Morin B, Whelan SP, Schwartz TU, Ploegh HL, EMBO Rep. 2017 Apr 10. pii: e201643764. doi: 10.15252/embr.201643764. PMID:28396572

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1756 Kb) [Save to disk]

Biological Unit Coordinates (5uk4.pdb1.gz) 884 Kb

Biological Unit Coordinates (5uk4.pdb2.gz) 880 Kb

CSU: Contacts of Structural Units for 5UK4

Structure Factors (7127 Kb)

Retrieve 5UK4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5UK4 from S2C, [Save to disk]

Re-refined 5uk4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5UK4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5uk4] [5uk4_A] [5uk4_B] [5uk4_C] [5uk4_D] [5uk4_E] [5uk4_F] [5uk4_G] [5uk4_H] [5uk4_I] [5uk4_J] [5uk4_K] [5uk4_L] [5uk4_M] [5uk4_N] [5uk4_O] [5uk4_P] [5uk4_Q] [5uk4_R] [5uk4_S] [5uk4_T] [5uk4_a] [5uk4_b] [5uk4_c] [5uk4_d] [5uk4_e] [5uk4_f] [5uk4_g] [5uk4_h] [5uk4_i] [5uk4_j] [5uk4_k] [5uk4_l] [5uk4_m] [5uk4_n] [5uk4_o] [5uk4_p] [5uk4_q] [5uk4_r] [5uk4_s] [5uk4_t] [5uk4_u] [5uk4_v] [5uk4_w] [5uk4_x]

SWISS-PROT database:

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