5UL6 Viral Protein date Jan 24, 2017
title The Molecular Mechanisms By Which Ns1 Of The 1918 Spanish In Virus Hijack Host Protein-Protein Interactions
authors Q.Shen, D.Zeng, B.Zhao, P.Li, J.H.Cho
compound source
Molecule: Adapter Molecule Crk
Chain: A
Synonym: Proto-Oncogene C-Crk,P38
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Crk
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Proline-Rich Motif Of Nonstructural Protein 1 Of A Virus;
Chain: M
Engineered: Yes
Synthetic: Yes
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
symmetry Space Group: P 1 21 1
R_factor 0.167 R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
27.650 39.260 29.030 90.00 98.43 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand ACE, NH2 enzyme
Primary referenceThe Molecular Mechanisms Underlying the Hijack of Host Proteins by the 1918 Spanish Influenza Virus., Shen Q, Zeng D, Zhao B, Bhatt VS, Li P, Cho JH, ACS Chem Biol. 2017 May 19;12(5):1199-1203. doi: 10.1021/acschembio.7b00168. Epub, 2017 Apr 5. PMID:28368102
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (5ul6.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 5UL6
  • CSU: Contacts of Structural Units for 5UL6
  • Structure Factors (135 Kb)
  • Retrieve 5UL6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UL6 from S2C, [Save to disk]
    • View 5UL6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5UL6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ul6_M] [5ul6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5UL6
  • Community annotation for 5UL6 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science