5UN6	Signaling Protein De Novo Protein	date	Jan 30, 2017
title	Frizzled-8 Complex With Designed Surrogate Wnt Agonist, A1 D
authors	C.Y.Janda, K.C.Garcia, K.M.Jude
compound		source
Molecule: Frizzled-8 Chain: A, B, C, D Fragment: Unp Residues 28-150 Synonym: Hfz8 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fzd8 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Designed Wnt Agonist B12 Chain: E, F, G, H Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_plasmid: Pet28
symmetry	Space Group: P 1 2 1	R_factor 0.200 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.420 36.450 125.530 90.00 93.73 90.00
method	X-Ray Diffraction	resolution	3.20 Å
Primary reference	Surrogate Wnt agonists that phenocopy canonical Wnt and beta-catenin signalling., Janda CY, Dang LT, You C, Chang J, de Lau W, Zhong ZA, Yan KS, Marecic O, Siepe D, Li X, Moody JD, Williams BO, Clevers H, Piehler J, Baker D, Kuo CJ, Garcia KC, Nature. 2017 May 11;545(7653):234-237. doi: 10.1038/nature22306. Epub 2017 May 3. PMID:28467818

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk] Biological Unit Coordinates (5un6.pdb1.gz) 34 Kb Biological Unit Coordinates (5un6.pdb2.gz) 33 Kb Biological Unit Coordinates (5un6.pdb3.gz) 33 Kb Biological Unit Coordinates (5un6.pdb4.gz) 33 Kb CSU: Contacts of Structural Units for 5UN6 Structure Factors (172 Kb) Retrieve 5UN6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UN6 from S2C, [Save to disk] Re-refined 5un6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5UN6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5UN6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5un6_E] [5un6_D] [5un6_G] [5un6_H] [5un6_F] [5un6] [5un6_B] [5un6_A] [5un6_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5UN6

Community annotation for 5UN6 at PDBWiki (http://pdbwiki.org)

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