5URA Lipid Binding Protein Inhibitor date Feb 09, 2017
title Enantiomer-Specific Binding Of The Potent Antinociceptive Ag 26 To Anandamide Transporters Fabp7
authors H.C.Hsu, H.Li
compound source
Molecule: Fatty Acid-Binding Protein, Brain
Chain: A, B, C, D
Synonym: Brain Lipid-Binding Protein,Blbp,Brain-Type Fatty Binding Protein,B-Fabp,Fatty Acid-Binding Protein 7,Mammary Growth Inhibitor Related;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fabp7, Blbp, Fabpb, Mrg
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.180 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.840 73.330 70.530 90.00 92.98 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand 8KS, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe Antinociceptive Agent SBFI-26 Binds to Anandamide Transporters FABP5 and FABP7 at Two Different Sites., Hsu HC, Tong S, Zhou Y, Elmes MW, Yan S, Kaczocha M, Deutsch DG, Rizzo RC, Ojima I, Li H, Biochemistry. 2017 Jul 11;56(27):3454-3462. doi: 10.1021/acs.biochem.7b00194., Epub 2017 Jun 28. PMID:28632393
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]
  • Biological Unit Coordinates (5ura.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (5ura.pdb2.gz) 47 Kb
  • Biological Unit Coordinates (5ura.pdb3.gz) 46 Kb
  • Biological Unit Coordinates (5ura.pdb4.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 5URA
  • CSU: Contacts of Structural Units for 5URA
  • Structure Factors (1329 Kb)
  • Retrieve 5URA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5URA from S2C, [Save to disk]
  • View 5URA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5URA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ura_D] [5ura_C] [5ura_A] [5ura_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5URA
  • Community annotation for 5URA at PDBWiki (http://pdbwiki.org)

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