5USF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand YSA enzyme
Gene LDBPK
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceLeishmania donovani tyrosyl-tRNA synthetase structure in complex with a tyrosyl adenylate analog and comparisons with human and protozoan counterparts., Barros-Alvarez X, Kerchner KM, Koh CY, Turley S, Pardon E, Steyaert J, Ranade RM, Gillespie JR, Zhang Z, Verlinde CLMJ, Fan E, Buckner FS, Hol WGJ, Biochimie. 2017 Apr 17. pii: S0300-9084(17)30100-1. doi:, 10.1016/j.biochi.2017.04.006. PMID:28427904
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk]
  • Biological Unit Coordinates (5usf.pdb1.gz) 129 Kb
  • Biological Unit Coordinates (5usf.pdb2.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 5USF
  • CSU: Contacts of Structural Units for 5USF
  • Structure Factors (2035 Kb)
  • Retrieve 5USF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5USF from S2C, [Save to disk]
  • Re-refined 5usf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5USF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5usf] [5usf_A] [5usf_B] [5usf_C] [5usf_D]
  • SWISS-PROT database:

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