5V1E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NH2 enzyme
Primary referenceIn silico optimization of a guava antimicrobial peptide enables combinatorial exploration for peptide design., Porto WF, Irazazabal L, Alves ESF, Ribeiro SM, Matos CO, Pires AS, Fensterseifer ICM, Miranda VJ, Haney EF, Humblot V, Torres MDT, Hancock REW, Liao LM, Ladram A, Lu TK, de la Fuente-Nunez C, Franco OL, Nat Commun. 2018 Apr 16;9(1):1490. doi: 10.1038/s41467-018-03746-3. PMID:29662055
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (5v1e.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 5V1E
  • CSU: Contacts of Structural Units for 5V1E
  • Original NMR restraints for 5V1E from PDB
  • Retrieve 5V1E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V1E from S2C, [Save to disk]
  • View 5V1E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v1e_A]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science