5VA0	Transcription Dna	date	Mar 24, 2017
title	Glucocorticoid Receptor Dna Binding Domain In Complex With A Response Element From Vcam-1 Promoter
authors	E.R.Weikum, E.A.Ortlund
compound		source
Molecule: Glucocorticoid Receptor Chain: A, B Fragment: Unp Residues 84-155 Synonym: Gr,Nuclear Receptor Subfamily 3 Group C Member 1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nr3c1, Grl Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'-D(Cpgpgpcptpgpapcptpcpaptpcp 3'); Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
Molecule: Dna (5'-D(Cptptpgpaptpgpapgptpcpapgp 3'); Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 21 21 21	R_factor 0.197 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.442 96.280 105.223 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Tethering not required: the glucocorticoid receptor binds directly to activator protein-1 recognition motifs to repress inflammatory genes., Weikum ER, de Vera IMS, Nwachukwu JC, Hudson WH, Nettles KW, Kojetin DJ, Ortlund EA, Nucleic Acids Res. 2017 Jun 7. doi: 10.1093/nar/gkx509. PMID:28591827

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk] Biological Unit Coordinates (5va0.pdb1.gz) 36 Kb LPC: Ligand-Protein Contacts for 5VA0 CSU: Contacts of Structural Units for 5VA0 Structure Factors (110 Kb) Retrieve 5VA0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VA0 from S2C, [Save to disk]

View 5VA0 in 3D

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Visual 3D analysis of 5VA0

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5va0_A] [5va0_C] [5va0_B] [5va0_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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