5VAR		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	92Y	enzyme
Primary reference	Targeting lysine specific demethylase 4A (KDM4A) tandem TUDOR domain - A fragment based approach., Upadhyay AK, Judge RA, Li L, Pithawalla R, Simanis J, Bodelle PM, Marin VL, Henry RF, Petros AM, Sun C, Bioorg Med Chem Lett. 2018 Jun 1;28(10):1708-1713. doi:, 10.1016/j.bmcl.2018.04.050. Epub 2018 Apr 19. PMID:29691138

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk] Biological Unit Coordinates (5var.pdb1.gz) 20 Kb LPC: Ligand-Protein Contacts for 5VAR CSU: Contacts of Structural Units for 5VAR Structure Factors (322 Kb) Retrieve 5VAR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VAR from S2C, [Save to disk]

View 5VAR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5var_A] SWISS-PROT database:

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