5VFT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D
  • proteasome-activating ATPase...


  • E

  • proteasome complex
  • F


    H, h


    J, j


    K, k


    N, O, o, n


    R, r


    T, t


    U
  • enzyme regulator activity


  • V
  • enzyme regulator activity


  • W


    X


    Y
  • enzyme regulator activity


  • Z


    a


    c
  • endopeptidase activator acti...


  • d


    e


    f
  • enzyme regulator activity


  • g, G
  • positive regulation of NF-ka...

  • i, I


    l, L


    m, M


    p, P


    q, Q


    s, S


    Primary referenceStructural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome., Zhu Y, Wang WL, Yu D, Ouyang Q, Lu Y, Mao Y, Nat Commun. 2018 Apr 10;9(1):1360. doi: 10.1038/s41467-018-03785-w. PMID:29636472
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1939 Kb) [Save to disk]
  • Biological Unit Coordinates (5vft.pdb1.gz) 1925 Kb
  • LPC: Ligand-Protein Contacts for 5VFT
  • CSU: Contacts of Structural Units for 5VFT
  • Retrieve 5VFT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VFT from S2C, [Save to disk]
  • View 5VFT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vft_A] [5vft_B] [5vft_C] [5vft_D] [5vft_E] [5vft_F] [5vft_G] [5vft_H] [5vft_I] [5vft_J] [5vft_K] [5vft_L] [5vft_M] [5vft_N] [5vft_O] [5vft_P] [5vft_Q] [5vft_R] [5vft_S] [5vft_T] [5vft_U] [5vft_V] [5vft_W] [5vft_X] [5vft_Y] [5vft_Z] [5vft_a] [5vft_b] [5vft_c] [5vft_d] [5vft_e] [5vft_f] [5vft_g] [5vft_h] [5vft_i] [5vft_j] [5vft_k] [5vft_l] [5vft_m] [5vft_n] [5vft_o] [5vft_p] [5vft_q] [5vft_r] [5vft_s] [5vft_t]
  • SWISS-PROT database:

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