5VJO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, NA	enzyme
Gene Ontology	Chain Function Process Component E, F
Primary reference	Germinal center antibody mutation trajectories are determined by rapid self/foreign discrimination., Burnett DL, Langley DB, Schofield P, Hermes JR, Chan TD, Jackson J, Bourne K, Reed JH, Patterson K, Porebski BT, Brink R, Christ D, Goodnow CC, Science. 2018 Apr 13;360(6385):223-226. doi: 10.1126/science.aao3859. PMID:29650674

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (347 Kb) [Save to disk] Biological Unit Coordinates (5vjo.pdb1.gz) 172 Kb Biological Unit Coordinates (5vjo.pdb2.gz) 172 Kb LPC: Ligand-Protein Contacts for 5VJO CSU: Contacts of Structural Units for 5VJO Structure Factors (2143 Kb) Retrieve 5VJO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VJO from S2C, [Save to disk]

View 5VJO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vjo_A] [5vjo_B] [5vjo_C] [5vjo_D] [5vjo_E] [5vjo_F] SWISS-PROT database:

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