5VKC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9EA, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure-guided design of a series of MCL-1 inhibitors with high affinity and selectivity., Bruncko M, Wang L, Sheppard GS, Phillips DC, Tahir SK, Xue J, Erickson S, Fidanze S, Fry E, Hasvold L, Jenkins GJ, Jin S, Judge RA, Kovar PJ, Madar D, Nimmer P, Park C, Petros AM, Rosenberg SH, Smith ML, Song X, Sun C, Tao ZF, Wang X, Xiao Y, Zhang H, Tse C, Leverson JD, Elmore SW, Souers AJ, J Med Chem. 2015 Mar 12;58(5):2180-94. doi: 10.1021/jm501258m. Epub 2015 Feb 26. PMID:25679114
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (5vkc.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 5VKC
  • CSU: Contacts of Structural Units for 5VKC
  • Structure Factors (617 Kb)
  • Retrieve 5VKC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VKC from S2C, [Save to disk]
  • Re-refined 5vkc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5VKC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vkc] [5vkc_A] [5vkc_B]
  • SWISS-PROT database:

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